The cycle, end to end
People call it the revenue cycle. The work splits into the front end (before and at the visit), the middle (turning the visit into a claim) and the back end (getting paid). Most denials are born at the front end and discovered at the back end, which is why a billing company that only works the back end is fighting with one hand.
Eligibility and benefits checks
Before the visit, someone confirms the patient's coverage is active, the plan is the one on file, the service is covered, and what the patient will owe (copay, coinsurance, deductible). Eligibility is one of the HIPAA standard electronic transactions, so it can be checked automatically against most payers (CMS).
- What a billing company does: runs checks in batches before scheduled visits, flags inactive coverage or plan changes, and tells the front desk what to collect.
- What stays with you: collecting the right insurance card and demographic details at check-in. No automation fixes a wrong member ID.
- For uninsured or self-pay patients: providers must give a good faith estimate of expected charges on request or when services are scheduled at least three business days ahead (CMS; No Surprises Act). Ask whether your billing company produces these.
Prior authorizations
Many payers require approval before certain services. It's heavy work: physicians in the AMA's 2024 survey reported an average of 39 prior authorizations a week and 13 hours of physician and staff time on them (AMA).
Billing companies vary most here. Some file and track requests; others only check that an authorization exists before submitting the claim. Clinical justification still comes from your clinicians' notes. From 2026, CMS requires Medicare Advantage organizations and Medicaid and CHIP programs and plans to decide standard requests within 7 calendar days and expedited ones within 72 hours (CMS-0057-F): a deadline worth tracking.
Coding: a separate discipline
Why it matters: if the same company codes and is paid a percentage of collections, its incentives point one way. HHS-OIG has said for decades that percentage billing arrangements may increase the risk of upcoding (OIG).
Charge entry and claim scrubbing
Once a visit is coded, the charge becomes a claim. 'Scrubbing' is checking it before it goes out, so the payer doesn't reject it for something fixable:
- Patient and policy details match what the payer has on file.
- Codes pass payer edits, such as Medicare's National Correct Coding Initiative edits for code pairs that shouldn't be billed together (CMS).
- Modifiers, place of service, rendering and billing provider details are present and consistent.
- Any required authorization or referral number is attached.
- The claim is inside the payer's filing deadline: for Medicare, one calendar year after the date of service (42 CFR 424.44).
A claim that passes and has no defect preventing payment is what Medicare calls a clean claim; Medicare must pay most clean claims within 30 days of receipt or owe interest (SSA §1842(c); CMS manual §80.2). Clean claims are the cheapest claims a practice ever sends.
Submission, follow-up and payment posting
Claims usually go out through a clearinghouse, which checks format and routes them to payers. The billing company then watches for acknowledgments and rejections, follows up on claims with no response, and posts each payment from the payer's remittance. Every adjustment comes with a standard Claim Adjustment Reason Code saying why the claim was paid differently than billed (X12). Posting carefully is what makes denials visible: a denial missed at posting is a denial nobody works.
Denial management and appeals
A denial is a payer's decision not to pay a claim or line. The work is to sort it, fix or appeal it before the deadline, and stop the cause recurring:
- Sort by reason code and payer. Eligibility, missing authorization and duplicate-claim denials are usually fixed and resubmitted; medical-necessity denials usually need records and an appeal.
- Fix or appeal within the payer's window, with the documentation it asks for.
- Find the cause. If one payer starts denying one code, that's a rule change, not bad luck. See payer friction.
- Report initial and final denial rates by payer and reason, so you can see whether the fixes work. See benchmarks.
Appeals are worth filing. KFF found fewer than 1% of denied in-network claims were appealed in HealthCare.gov Marketplace plans in 2024 (KFF); HHS-OIG found that 13% of the Medicare Advantage prior authorization denials it reviewed, and 18% of payment denials, met Medicare coverage rules (OIG).
- A claim comes back with a reason code saying the patient's coverage was not in effect on the date of service.
- The biller checks eligibility again and finds the patient changed plans at the start of the month; the new card was never entered.
- The front desk is asked for the new card, the claim is corrected and sent to the right payer within its filing window.
- The biller adds the payer to the pre-visit eligibility batch and tells the practice that a re-check at every visit would have caught it.
Resubmitting fixed one claim. Telling the front desk fixed the next fifty.
Patient billing
After payers pay, the patient owes the rest: copays, coinsurance and deductibles. Billing companies send statements, take payments, set up payment plans and answer patients' questions, under your name and your policies. Ask whether they answer patient calls, in what hours, and whether they send accounts to collections (and if so, only with your approval).
Reporting
The last job is telling you how it's going: collections, denials by payer and reason, days in A/R and aging, with definitions you can check. The benchmarks page explains each metric and how to compute it from your own data.
Questions people ask
Do medical billing companies do coding?
Some do; many don't. Coding is a separate discipline. Ask whether coding is included, who does it, and how it's audited.
Do billing companies handle prior authorizations?
Some file and track them; others only check one exists before billing. Ask which, and who supplies the clinical documentation.
What's the difference between a rejection and a denial?
A rejection is a claim that didn't get into the payer's system (usually a format or data error) and can be corrected and resent. A denial is a claim the payer processed and refused to pay, with a reason code.
What is claim scrubbing?
Checking a claim against payer and federal edits before it's sent, such as Medicare's NCCI edits, so it isn't rejected or denied for a fixable error.
Sources
Every figure and rule on this page links to the organization that produced it. Check the source before you rely on it: payer and federal rules change.
- Administrative Simplification: Transactions overview (HIPAA standard transactions, including eligibility) · Centers for Medicare & Medicaid Services
- What is a good faith estimate? (No Surprises Act) · Centers for Medicare & Medicaid Services
- No Surprise Billing · Centers for Medicare & Medicaid Services
- Physicians concerned AI increases prior authorization denials (2024 AMA prior authorization physician survey, February 24, 2025) · American Medical Association
- CMS Interoperability and Prior Authorization Final Rule (CMS-0057-F) fact sheet, January 17, 2024 · Centers for Medicare & Medicaid Services
- Compliance Program Guidance for Third-Party Medical Billing Companies (63 FR 70138, December 1998) · HHS Office of Inspector General
- National Correct Coding Initiative (NCCI) edits · Centers for Medicare & Medicaid Services
- 42 CFR 424.44: Time limits for filing claims · Electronic Code of Federal Regulations
- Social Security Act §1842(c)(2)–(3), 42 U.S.C. 1395u: clean claim definition and payment timing · U.S. Code, via Cornell Legal Information Institute
- Medicare Claims Processing Manual, Chapter 1 (§30.2.4 Payment to Agent; §80.2 clean claims and interest) · Centers for Medicare & Medicaid Services
- Claim Adjustment Reason Codes · X12
- Claims Denials and Appeals in ACA Marketplace Plans in 2024 (March 24, 2026) · KFF
- Some Medicare Advantage Organization Denials of Prior Authorization Requests Raise Concerns About Beneficiary Access to Medically Necessary Care (OEI-09-18-00260, April 2022) · HHS Office of Inspector General
Get an email when this guide changes
Payer rules and federal deadlines move. Leave your email to hear when a page here is updated with a new rule, source or checklist item.